W. Zhang, F. Sun, and R. Jiang, Integrating multiple protein-protein interaction networks to prioritize disease genes: a Bayesian regression approach. BMC Bioinformatics, 2011. 12 Suppl 1: p. S11.

W. Zhang, Y. Chen, F. Sun, and R. Jiang, DomainRBF: a Bayesian regression approach to the prioritization of candidate domains for complex diseases. BMC Syst Biol, 2011. 5: p. 55.

X. Yao, H. Hao, Y. Li, and S. Li, Modularity-based credible prediction of disease genes and detection of disease subtypes on the phenotype-gene heterogeneous network. BMC Syst Biol, 2011. 5: p. 79.

S. Li, B. Zhang, and N. Zhang, Network target for screening synergistic drug combinations with application to traditional Chinese medicine. BMC Syst Biol, 2011. 5 Suppl 1: p. S10.

W. Wang and X. Zhang, Network-based group variable selection for detecting expression quantitative trait loci (eQTL). BMC Bioinformatics, 2011. 12: p. 269. C. Ye, Y. Liu, and X. Zhang, Observations on shifted cumulative regulation. Genome Biol, 2011. 12(4): p. 404.

S. Li, [Network target: a starting point for traditional Chinese medicine network pharmacology]. Zhongguo Zhong Yao Za Zhi, 2011. 36(15): p. 2017-20.

Z. Wu, X. Wang, and X. Zhang, Using non-uniform read distribution models to improve isoform expression inference in RNA-Seq. Bioinformatics, 2011. 27(4): p. 502-8.

Y. Chen, T. Jiang, and R. Jiang, Uncover disease genes by maximizing information flow in the phenome-interactome network. Bioinformatics, 2011. 27(13): p. i167-76.

L. Meng, F. Sun, X. Zhang, and M. S. Waterman, Sequence alignment as hypothesis testing. J Comput Biol, 2011. 18(5): p. 677-91.

Y. Chen, J. Gu, D. Li, and S. Li, Time-course network analysis reveals TNF-alpha can promote G1/S transition of cell cycle in vascular endothelial cells. Bioinformatics, 2011.